Projects 2026 Open

The CDT is currently recruiting to the following PhD projects to start in September 2026. See below for details of each project, including the academic supervisors. 


Developing an advanced glomerulus-on-a-chip model to study inflammation in the kidney

Supervisors: Dr Maria FragiadakiProf Thomas Iskratsch

Industry Partner: Vertex

This PhD, supported by Vertex, will develop a next-generation Glomerulus-on-a-Chip platform that integrates engineering design, microfluidics, mechanobiology and biomaterials to recreate the biomechanical and biochemical microenvironment of the human glomerulus. The project will incorporate advanced chip fabrication, tunable extracellular-matrix architectures, and physiologically relevant shear stress and flow-driven filtration, enabling quantitative control of disease-relevant mechanical cues. A key focus is engineering dynamic co-culture interfaces between podocytes, endothelial and mesangial cells with immune cells, allowing mechanotransduction and inflammatory signalling to be modelled in a controlled microengineered system.

The student will use sensor integration, live-cell imaging and computational readouts to characterise filtration, cytokine transport and matrix remodelling in real time. The model will be designed as a scalable and reproducible in-vitro technology using commercially derived primary cells to ensure robustness.

This technology-driven platform will be used to investigate how inflammatory and fibrotic processes affect glomerular barrier function and downstream tubular responses. Expected outcomes include a validated chip technology for studying kidney pathology and a mechanistic framework for personalising therapeutic testing. 


Development of a dual-use skin-on-a-chip model for assessment of oncology drug toxicity 

Supervisors: Prof John ConnellyDr Daniele Bergamaschi 

Industry Partner: AstraZeneca

Skin toxicity remains one of the most challenging dose-limiting side effects of oncology drugs, especially targeted therapies. Existing in vitro and animal models lack sufficient predictivity for clinical toxicity, hindering efforts to balance efficacy with safety in drug development. Development of validated human skin-on-chip platforms that mimic key toxicologic responses addresses this gap by providing industry and academia with more predictive tools, supporting safer and more effective anti-cancer drug discovery while minimising reliance on animal models.  The overall aim of this PhD studentship is to develop a next-generation vascularised skin-on-chip platform that accurately replicates essential skin toxicity responses to cancer therapeutics. 

The project will leverage QMUL’s state-of-the-art human skin models, which consist of a 3D printed skin equivalents containing keratinocytes, fibroblasts, endothelial cells, and resident macrophages. Building on this design, the proposed project will optimise the biophysical properties, perfusion and dosing of key drugs, establish robust toxicity readouts, and explore potential mechanisms of action.  In addition, new technological advances will be implemented through the engineering of a dual-chip system that enables simultaneous prediction of drug toxicity in the skin-on-chip device and therapeutic efficacy in cancer models, thereby facilitating direct assessment of the therapeutic index and supporting optimised anti-cancer drug selection. 

In collaboration with AstraZeneca, a major focus of the project will be to validate the skin-on-chip system with clinically relevant oncology agents to demonstrate correlation between in vitro readouts—target engagement, viability, proliferation, cytokine profiles, tissue integrity, immune activation—and clinical skin toxicity risk.


Targeting inflammatory pathways in asthma utilising an alveolar lung-on-a-chip model 

Supervisors: Dr Emma ChambersProf John Connelly

Industry Partner: Chiesi Farmaceutici
Asthma is a chronic lung condition and currently there are 7.2million people in the UK with the disease. Asthma is an inflammatory disease of the lung which results in airway remodelling, loss of elasticity, airway hyperresponsiveness and mucus hyperplasia. Asthma pathology is driven by a combination of lung stromal cells such as epithelial cells as well as lung resident immune cells such as macrophages, mast cells and T cells.  
Currently scientists study asthma either using mouse models of disease or static air-liquid-interphase culture systems – limitations to both these models mean they do not fully recapitulate human asthmatic lung mechanobiology. Therefore, there is a clear unmet need to develop more physiological lung models which model the human asthmatic lung including, relevant biophysical cues and immune cells. Preliminary data has shown that the EMULATE alveolar chip model recreates the human lung most effectively, with immune cells flowing through the endothelium and stretch caused by breathing recreated.
The overarching aim of this project is to engineer a novel asthma model using the EMULATE alveolar-chip platform.
To achieve this the following experimental aims are proposed:
1. Adapt the EMULATE alveolar-chip to model asthma, utilising asthma patient cell lines and disease mimicking biophysical cues (impaired stretch and fluid flow).
2. Incorporate myeloid cells into the model to make the asthma EMULATE model immune responsive.
3. Investigate the interplay between mechanical cues and immune cells in asthma disease severity/progression.
4. Test anti-inflammatory drugs using the immune responsive asthma EMULATE model to determine if inflammatory pathways are reduced.
Overall, this project will establish a novel asthma lung on a chip model with an immune cell component which can be used to test novel anti-inflammatory therapies. In addition, the studies will provide new insight into the mechanobiology of asthma progression.

Development of an immune-infiltrated adipose tissue-on-a-chip model for interactions between inflammation and dysfunction 

Supervisors: Dr Claire VilletteDr Stefaan Verbruggen

Industry Partner: CN-Bio

While healthy adipose tissue (AT) is key for energy storage and heat generation, its dysfunction contributes to the development of metabolic and cardiovascular diseases as well as cancer. AT dysfunction is characterized by chronic inflammation whereby immune cells infiltrate the tissue and induce further metabolic disturbances, contributing to a vicious cycle of AT dysfunction.
This exciting PhD studentship will develop new organ-on-chip models to recapitulate this vicious cycle of AT dysfunction, and couple them to a digital twin. The student will start by developing an advanced multicellular model of human AT, before introducing macrophage infiltration via state-of-the-art microfluidics. The student will then use this setup to inform the development of a computational model capturing the interactions between macrophage behaviour and AT dysfunction, leveraging the synergy between experimental and computational models.
Overall, this project will provide clinically-relevant in-vitro/in-silico disease models to investigate therapeutic avenues to counter AT dysfunction. Applications include obesity/diabetes disease modelling, dual-organ investigations (e.g: adipose-liver, adipose-cartilage interactions), as well as studies on bone-marrow fat influence on bone cancer.
The project is supported by our partnership with the organ-chip company, CN-Bio, and will use their commercial state-of-the-art multi-organ platform available within the Centre. This studentship also includes the option of a placement in CN-Bio's laboratories in Cambridge. The student will be part of a large multi-disciplinary organ-chip research group and will be supported by 3 post docs working on a new EPSRC grant in this area of organ-chip technology (EPSRC grant: Organ-chips for accelerated deployment of new medicines)

Development of brain tumour margin-on-a-chip model for treatment of tumour recurrence

Supervisors: Dr Christopher ChapmanDr Agnes Nishimura

Industry Partner: Coherence Neuro 
This project aims to engineer an organ-on-chip model that enables the co-culture of healthy neural cells with glioblastoma spheroids on a scale (millimetres) that microsurgical resection can be performed. After micro-resection, the regrowth of the remaining glioblastoma cells in the resection cavity will be monitored over time enabling quantification of recurrence characteristics and potential for screening novel therapeutic delivery. Three aims will be targeted in this project:
(1) Engineering a hydrogel-based microphysiological system capable of culturing healthy neural tissue and glioblastoma spheroids with access for microsurgical resection.
(2) Cellular characterisation of stages of recurrences at the on-chip tumour margin
(3) Embedding electronic sensors into the on-chip system tumour margin to enable testing of electrical treatment modalities such as tumour treating fields (TTFs) and monitoring physiological state changes during recurrence
This project will lead to improved understanding of phenotypic shifts in GBM cells over different recurrence timepoints in response to electrotherapies for GBM. Through a collaboration with Coherence Neuro, the successful candidate will be able to cross validate their findings with in vivo experiments using a novel electrotherapeutic device for GBM treatment.

Development of spinal cord injury and repair-on-a-chip model

Supervisors: Prof Julien GautrotDr Patrick Pallier

Industry Partner: BitBio
Spinal cord injury (SCI) affects over 4,400 people annually in the UK, with around 105,000 individuals currently living with the condition. These injuries often result in permanent disability, requiring long-term medical care, rehabilitation, and social support. With an average lifetime cost of £1.12 million per patient, SCI places a substantial burden on the NHS and wider healthcare system.
To support regenerative medicine approaches for SCI, human-based advanced in vitro models offer a promising alternative for predicting the efficacy and safety of biomaterials and cell therapies. However, suitable models of spinal cord damage and repair remain limited. This project aims to develop a novel model using 3D printed microfluidic platforms.
1. Chip engineering of spinal cord injury. Microfluidic chips will be designed to deliver reproducible compressive injury to motor neuron bundles. Using DLP printing, motor neuron spheroids will be guided through microchannels using chemokine gradients. A pneumatic chamber (microfabricated separately) will apply controlled compression. Chips will be characterised via electron and confocal microscopy, nanoindentation, and DMA.
2. Model Validation. Injury response will be assessed using bit.bio motor neuron bundles. Cell viability and apoptosis will be evaluated via live/dead assays and Annexin V/caspase markers. Axonal fate will be analysed through immunostaining and confocal imaging.

3. Repair Evaluation. Injured bundles will be treated with peptide amphiphile hydrogels with comparison to fibrin gels known to enable poor recovery potential. Regeneration will be assessed by axon connectivity (confocal microscopy/immunostaining) and calcium transport (fluorescence imaging).


3D printing complex microenvironments for next generation musculoskeletal organ-chips

Supervisors: Prof Hazel ScreenDr Nidal Khatib

Industry Partner: Cellink
Organ-chip models offer exciting opportunity to unlock discovery science and pre-clinical testing, by providing more human-relevant models of disease. However, the design of appropriate niche environments within models to maintain physiological or pathological cell phenotype and function is crucial for their success.
Here we focus on the design of appropriate niche environments to capture the tendon-bone junction. The tendon-bone interface is a common site of painful, debilitating injury, where a vicious cycle of inflammation, tissue remodelling and interface stiffening drives further degeneration. We currently have no clear treatments for injury at the tendon-bone interface, but models to unpick and thus modulate the interplay between inflammation and tissue stiffening offer exciting potential for new drug targets.
In this project, we will work with the BIONOVA X 3D bioprinter (supplied by industrial partner CELLINK), to select and optimise printable hydrogels and light patterning approaches, to capture the tendon-bone stiffness gradient, and to integrating growth factor gradients which capture the biological gradient between the tissues. We will drive inflammation within the model, then utilise printing approaches to modulate the tissue stiffness at the junction, and explore how this impacts injury progression, driving mechanistic understanding of disease progression and identifying potential treatment targets for tendon-bone injuries.
CELLINK’s focus is in developing approaches to bioprint within organ-chip platforms. They will provide technical expertise, supervision and a placement focused on optimising the printing approaches, and will also work with us to explore how we translate these to support the development of a range of different models.

Advancing animal-free organ-on-a-chip models of arthritis using PeptiMatrix

Supervisors:   Prof Martin KnightDr Tim Hopkins

Industry Partner: Peptimatrix
The extracellular matrix (ECM) is a three-dimensional (3D), bioactive, instructive network that regulates cell behaviour through biochemical and biophysical cues. The ECM plays a crucial role in musculoskeletal (MSK) tissue development, function and dysfunction and should be considered an essential component in the design of Organ-on-a-Chip (OoC) models
Paradoxically, given the animal replacement potential of OoC, many of the hydrogels that are currently used to mimic the 3D ECM in MSK OoC systems are still animal-derived e.g. Matrigel™ and collagen type 1. This therefore represents a significant, but largely overlooked, source of animal use that necessitates replacement. In addition, animal-derived hydrogels are ill-defined, poorly-customisable, prone to batch-to-batch variability, and demonstrate insufficient mechanical properties. There is an urgent need for new, characterised, customisable and animal-free hydrogels for use in OoC models.
This project seeks to address this requirement using PeptiMatrix™, a fully synthetic and customisable peptide hydrogel platform designed for 3D cell culture. PeptiMatrix™ is available in a range of different stiffnesses, and with a range of functional augmentations. This studentship will evaluate the feasibility of using these formulations in a number of different OoC systems (Emulate, MIMETAS, BiomimX), and to model a number of MSK tissues (synovium, cartilage, bone). The project will assess the ability of these gels to maintain MSK cell viability and phenotype, transmit mechanical strain and ultimately to generate physiologically-relevant, engineered MSK tissues within OoC.
With technical and strategic consultancy provided by the PeptiMatrix™ team, this project could re-define 3D tissue microenvironments within MSK OoC. In addition, the applicability of these new materials and methodologies will not be limited to MSK tissues and has the potential for wide reaching impact across the OoC field.